Anvi’o is an open-source, community-driven analysis and visualization platform for ‘omics data.

Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline—modeling, rigging, animation, simulation, rendering, compositing and motion tracking, video editing and 2D animation pipeline.

FigureGen is a program for generating graphics files from ADCIRC data.

Grace is a WYSIWYG 2D plotting tool for the X Window System and M*tif.

Jmol is a viewer for chemical structure data.

Lynx is a text based web browser.

Maestro is a graphic interface for Jaguar.

OpenCV is an open source computer vision library.